Gene LRR25_c (S.moellendorffii)
LRR25_c
Species: S.moellendorffii
Alias: LRR25_c
External Links:
Annotation:
Sequence
Name | Sequence Type | Origin | Length | Description | Download |
---|---|---|---|---|---|
LRR25_c.AA | Protein | None | 257 | None | Fasta, JSON |
LRR25_c.NA | RNA | None | 774 | None | Fasta, JSON |
LRR25_c.kin_dom | Protein Kinase Domain | None | 229 | None | Fasta, JSON |
Protein domains of LRR25_c.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
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Kinase | LRR25_c.AA | TKL | 13-233 | 22 | 9e-47 | 161.7 | In-house | 72-364 (364) | Show / Hide |
Range on Protein: 13-233 Range on HMM: 72-364/364 Sequence Identity: 22% (68 aa) FEKELHLLGRAHHSCLVNLIGYCEVDK---------------LLVFEFMPRGT-LSQNIYTKTPPLDWVSRIRIAEQAARGLEYLHRYAS-----PSIIH .|.|. .. | .| .| ..||| . .| |..|.|. |.. . | |.|.| ..|||..||| | ||| EEEEIMMMSRLRHPNIVQFMGYCCCPPCGCVCMHPVGPWGQLCIVMEYCPGGSLLHYLH--------WHQRCRWALDIARGMNYLHSMNPKWCTKPPIIH RDVKSSNILLDYNWN--------------AHVSNFGLCS-LEETQ--------------------ASGTTITTPGYLDPEY----------------GSC || ||.|||.| ||. . .. |||. ..... ...| . ||... || . RDLKSKNILVDENWTNVSNYMYNPNADWCCKICDFGLSRFMSQSGNMNDTMTTMMESAEHQNNRKTTMTQCGTPRWMAPEVLRGQMNYTEKVGIDEFCKG LRLTAKSDVYSFGVVLLELLSGEKPIDSSRNIQDLAA----WVLDLVGRDEWNSVLDQKLAL----PPQPEPLYNAVKLSLECTKVRGKDRPTMSEVAQR . . |.||||||.|| |.|....| . ... ... . . .|. . .. .| | . || .| . ..||...|. .| FEYSEKCDVYSFGIVLWEILTRCRPYYDYPYMPMIFQDPFEEMFMMVCDKGLRPPIPPIWQNHHKMCPCPDCPPSMKKLMQDCWDHDPEKRPSFQEILKR L | L |
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Kinase | LRR25_c.AA | IRAK | 4-170 | 33 | 6.6e-35 | 121.19 | In-house | 38-228 (317) | Show / Hide |
Range on Protein: 4-170 Range on HMM: 38-228/317 Sequence Identity: 33% (64 aa) SDENRSEKMFEK---ELHLLGRAHHSCLVNLIGYC-EVDKL-LVFEFMPRGTLSQNIYTKT---PP--LDWVSRIRIAEQAARGLEYLHRYASP-SIIHR . .| ... | || .. | .| .| | ||| | ... ||...|| |.| . || | | |. |.. .|.|...|| . .|||. MSWNEHWQRFQQSYNELKVCCRCRHPNIVPLYGYCTERQCHCLVYPYMPNGSLEDRLWCQDGQCPPKPLSWHQRCSICWGTACGIQFLHQNHPCTPIIHG DVKSSNILLDYNWNAHVSNFGLCS------LEETQAS-----GTTITTPGYLDPEYGS--CLRLTAKSDVYSFGVVLLELLSGEKPIDSSR |.||.||||| . .. . |||. | | . ....| |. ||. .|| |.||||||.||||.|.|... .. | DIKSANILLDQHFTPKICDFGLHRFGHPASHKEKQTYTCMMTSHVRGTTWYMPPEFIRDPQGQLTKKTDVYSFGIVLLEVLTGCRAVYDDR |
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Kinase | LRR25_c.AA | TKL-Unique | 6-165 | 28 | 4.1e-31 | 107.03 | In-house | 35-233 (290) | Show / Hide |
Range on Protein: 6-165 Range on HMM: 35-233/290 Sequence Identity: 28% (57 aa) ENRSEKMFEKELHLLGRAH-HSCLVNLIGYCE---VDKL---LVFEFMPRGTLSQNIY---------TKTPPLDWVSRIRIAEQAARGLEYLHRYASPSI .|.... ||.|. .. . | | .| ..||| |. .| |..|.|.| .. . .|.. |...|...|.|..|||.. | | SNEMMQEFENEVNWMKKLHYHPNIVHYMGYCMDHQVYPPNMCIVMEYCPGGSLYDVLHQNNNNNNNNNNNCKLNMQQRVKMAIDIAQGMYYLHHCEPP-I IHRDVKSSNILLDYN-----WNAHVSNFGLCSLEETQASGTTI-----------TTPGYLDPEYGSC--LRLTAKSDVYSFGVVLLELLSGEK------P |||| ||||.|.| | ||. .. |||. . . .|.. ... .. || . . ||||||||.|| |..... | IHRDLKSSNFLVDNNSNIAEWNIKICDFGLSKFNSKINKMTNNEHKGTRNQTRCGSFRWMAPEVLRMNFCQYSEKSDVYSFGIVLWEIATRKITKTYKKP |
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Kinase | LRR25_c.AA | Dicty4-Unclassified | 13-165 | 34 | 5.5e-30 | 99.87 | In-house | 45-207 (263) | Show / Hide |
Range on Protein: 13-165 Range on HMM: 45-207/263 Sequence Identity: 34% (59 aa) FEKELHLLGRAHHSCLVNLIGYCEVD------KLLVFEFMPRGTLSQNIY----TKTPPLDWVS--RIRIAEQAARGLEYLHRYASPSIIHRDVKSSNIL | || .|| | || . ||| | |||..|.| | . |. . |..| |.|. .|| . .||||.|||||| FKKEVEILGSIQHPNLVKCYGYCINPRSHKSTMCIVMEFMHKGNLFEVIHSKPSEQQQPIKLDDTLIIKYAFDIAQGMQHLH---TRNFIHRDIKSSNIL LDYNWNAHVSNFGLCSLEETQASGTTIT-TPGYLDPEYGSCLR---LTAKSDVYSFGVVLLELLSGEKP .| . |. . ||. . ||| || || ||. . ||||||....| ||. |. | MDKHFNIKIADFGISRVIDFNFNMTTIAGTPKWESPE---CLMHESYNQKSDVYSYAMMLYELATGDEP |
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Kinase | LRR25_c.AA | LRRK | 13-167 | 31 | 3.5e-25 | 86.01 | In-house | 104-284 (351) | Show / Hide |
Range on Protein: 13-167 Range on HMM: 104-284/351 Sequence Identity: 31% (58 aa) FEKELHLLGRAHHSCLVNLIGYCEVDKLLVFEFMPRGTLSQNIYTKT--------PPLDWVSRIRIAEQAARGLEYLHRYASPSIIHRDVKSSNILL--- | .|.... . .|...|.|.|.| .| |..| |.|.. . | . ..| ...|| | |.|.||||. ..|.||||| || |||| FRHEVWIMSHLNHPNIVSLKGFCIHPLCMVMEYAPHGDLYHFLHNKKQDGFHFMKAHISWMLKLKIALQIAKGMEYLHS-HNPPIIHRDLKSPNILLWSS D---------YNWNAHVSNFGLCS----LEETQASGTTITTPGYLDPEYGSCLR------LTAKSDVYSFGVVLLELLSGE-KPID . . .|... ||. . . .. |.| . ..||.. || ..| | |.|.||||..| |||... | | PQNHSPNYPNAHVCAKIADFGISRMFQCFHMGVAKGCV-GNPGWMAPE---IMRYNGEEEYTEKVDCYSFGMILWELLTRQHHPFD |
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Kinase | LRR25_c.AA | DRK | 40-160 | 36 | 1.1e-23 | 77.11 | In-house | 73-196 (258) | Show / Hide |
Range on Protein: 40-160 Range on HMM: 73-196/258 Sequence Identity: 36% (45 aa) LLVFEFMPRGTLSQNIYTKTPPLDWVSRIRIAEQAARGLEYLHRYASPSIIHRDVKSSNILLDYNWNAHVSNFGLCS----LEETQASGTTITTPGYLDP . . |.|||| | . .|| ..... .|.|. ||| | ||||| || | | | .| |. ||| .. . | . ||. | CICMEYMPRGSLYNILHDESIEMDWPLMKQMMFDCAKGMIYLHC-CNPIIIHRDLKSHNLLVDEHWQVKVADFGLSTRFKKHKQHKFAMTMCGTPCWTAP EYGSCLRLTAKSDVYSFGVVLLELL | | | | |||||..|| |.. EVLRNQRYTEKADVYSFAIVLWECV |
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Kinase | LRR25_c.AA | Dicty4 | 44-165 | 36 | 1.3e-23 | 75.81 | In-house | 82-216 (277) | Show / Hide |
Range on Protein: 44-165 Range on HMM: 82-216/277 Sequence Identity: 36% (51 aa) EFMPRGTLSQNIYT------KTPPLDWVSRIR---IAEQAARGLEYLHRYAS--PSIIHRDVKSSNILLDYNWNAHVSNFGLCS----LEETQA-SGTTI |.||.|.| . . .||| ..| .| ||||. .|| . | ||||| ||.|.| | ||.. |. ||| |. .. |.. EYMPKGNLYSLLHDKPSEQQQSIKLDWPLIKRAMRMAFDAARGMNWLH---CCNPVIIHRDLKSHNLLVDKNWRVKVCDFGLSQYMKKHEDHKDNQMTAC TTPGYLDPEYGSCLRL---TAKSDVYSFGVVLLELLSGEKP ||.. || ... . |.|||||| || |.| .. | GTPCWMAPE---VMMHQPYNEKADVYSFGIVLWEILTRQEP |
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Kinase | LRR25_c.AA | TK | 4-233 | 14 | 1.4e-22 | 71.81 | In-house | 65-486 (486) | Show / Hide |
Range on Protein: 4-233 Range on HMM: 65-486/486 Sequence Identity: 14% (63 aa) SDENRSEKM--------------FEKELHLLG--RAHHSCLVNLIGYCEVDK--------------LLVFEFMPRGT----LSQNIYTKTPP-------- ... . ... . |. .. || .|.|.|.| .. ..| |.|| | | . .. |. AMSQEEFFDEEMHDRDGGEDFLEEAEEMKMMCHSLGHHPNIVRLYGVCTQGEPKPCFEVVVHQEPWMIVMEYMPHGDMDGSLRDYLRKCRPKFQHEQDCP -------------------------------------------------------------------LDWVSRIRIAEQAARGLEYLHRY----ASPSII |. .. .. |.|.|.||||. . .. DNQHNKYPPSKLHHCMKGDITYSHESNSPCPEEQDYDDDLIKDHPPPLTTKDLLQMAWQWCLTCKHQLTMHQLL-MCWQIACGMEYLHSKNCEFI-QNFV HRDVKSSNILLDYNWN-----------AHVSNFG--------LCSLEETQASGTTITTPG----------------------------YLDPEYGSCLR- |||. |.|.. | . . .. || |. . .. ...| .. || ||. HRDLAARNCLVGENNVCKWHFDGCGPVCKIADFGLSRQGSGVLARDIYSDDDYYRKSSYGTGRPMWPFEDDPWQDYYRQQSGGKLPIRWMAPE---CLND -----------LTAKSDVYSFGVVLLELLS-GEKPIDSSRNIQDLAAW-----VLDLVGRD-------EWNSVLDQKLALP-PQPEPLY----------- | ||||.||||.. |... |..| . || .. |.... | | .. .. |||. RVFSEAEKYGKFTTKSDVWSFGVLMWEIFTYGQEPYYGGMSNQDVWKDGDNQEVMEYLRRGGRLCRSGL-N---EVGYRMRMPQPPHCPDWMRYRMHPPH ---NAVKL-SLECTKVRGKDRPTMSEVAQRL .. . ..| . .||||.|.. ..| CPPEEYYDLMQQCWHYDPEDRPTFSQLHEQL |
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Kinase | LRR25_c.AA | Pkinase | 6-163 | 25 | 1.3e-21 | 77.5 | Pfam | 35-209 (293) | Show / Hide |
Range on Protein: 6-163 Range on HMM: 35-209/293 Sequence Identity: 25% (45 aa) ENRSEKMFEK-----ELHLLGRAHHSCLVNLIGYCEVDKLLV--FEFMPRG----TLSQNIY-TKTPPL--DWVSRIRIAEQAARGLEYLHRYASPSIIH ....... . |.... | .| . | |....| .. . .|... | |. | . .. .. .... | .|||||.|. .||| RHEKSWKDQTHRRLSEIQIMKRLNHPNIVRLYDWFEDKDHIYMVMEYCEGGLYVMDLFDYISTWRHGCFYFSEWECKFYMYQILRGLEYCHSM---GIIH RDVKSSNILLDYNWNA----HVSNFGLCS---LEETQASGTTITTPGYLDPEYGS-CLRLTAKSDVYSFGVVLLELLSGE ||.|..|||.| | . ... |||. . . | ||.|. || . . |.|..|.|..| |.|.|. RDLKPENILIDNNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGTPWYMAPEVIRGGQYYGPKVDMWSCGCILYEMLCGR |
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Kinase | LRR25_c.AA | RIPK | 41-165 | 30 | 1.6e-21 | 70.05 | In-house | 79-227 (290) | Show / Hide |
Range on Protein: 41-165 Range on HMM: 79-227/290 Sequence Identity: 30% (46 aa) LVFEFMPRGTLSQNIYTKT----PPLDWVSRIRIAEQAARGLEYLHRYASPSIIHRDVKSSNILLDYNWNAHVSNFGLCSLEETQASGT--------TI- .| |.|. | |. ||. .|. | | |. . ..| ||| | ||||| | .|||.| | .. .. ||| . .. |.. . IVMEYMENGSLWHFLHTKWPYQHHPDPWPLRCRMIHEISCGMCYLHSMN-PPIIHRDLKPENILVDNNFHVKIADFGLATWMMWSHSHQDRCNQREVYSM ------TTPGYLDPEYGS---CLR---LTAKSDVYSFGVVLLELLSGEKP | |..|| . | |.|||||..|. |.|.. .| KSKNRWGTLSYMPPEHFRTDNKKPIKVVTPKYDVYSFAIVMWEVLTQKHP |
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Kinase | LRR25_c.AA | MLK | 4-165 | 26 | 2.6e-21 | 70.79 | In-house | 43-235 (291) | Show / Hide |
Range on Protein: 4-165 Range on HMM: 43-235/291 Sequence Identity: 26% (52 aa) SDENRSEKMFEKELHLLGRAHHSC----LVNLIGYCEVD-K--LLVFEFMPRGTLSQNIYTKTP-------------PLDWVSRIRIAEQAARGLEYLHR ||. . . ||.| .| . | . . | | . . ..| |... | |. ...... | . ...| | |||..||| SDTYCEQWDFEMECRHLRILSHPNNHPCIIQFYGVCLQPPCHFCIVMEYCEGGSLYNVLHGARSKWMDANHNQKNDRVYDHDHAMNWALQCARGMHYLHS YASPSIIHRDVKSSNILLD------YNWNAHVSNFGL-CSLEETQAS-GTT-ITTPGYLDPEY---GSCLRLTAKSDVYSFGVVLLELLSGEKP | . ||||| ||.|||.| . .. .. ||. ... ... . . . |. . || | . . |.||.|.|||| |.|..| | MAPKPIIHRDLKSHNILIDEICHDMHHGTLKICDFGTSRDWHQMC-TNMMSNAGTYAWMAPEVIQQFRCEKYSEKCDVWSWGVVLWEMLTREVP |
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Kinase | LRR25_c.AA | S_TKc | 4-237 | 20 | 4.3e-13 | 15.13 | SMART | 19-231 (231) | Show / Hide |
Range on Protein: 4-237 Range on HMM: 19-231/231 Sequence Identity: 20% (53 aa) SDEN----------RSEKMFEKELHLLGRAHHSCLVNLIGYCE-VDKLLVFEFMPR--GTLSQNIYTKTPP-----LDWVSRIRIAEQAARGLEYLHRYA . . . .....|. .| . || .|.|..... . .|.|... |.| . | . .. .. ... | ...|||.|. RHKKTGRIVAIKIIK--EHIRREIQILKK-HHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPE-HARFYMYQICCALEYCHSHG SPSIIHRDVKSSNILLDYNWNAHVSNFGLCSLEETQASGTTITTPGYLDPEYGSCLRLTA-KSDVYSFGVVLLELLSGEKPIDSSRNIQDLAAWVLDLVG |||||.| .||||| . .. |||. . | . || |. || . |.|..|.|..| |.|.|. | . ..| . .. ---IIHRDLKPENILLDE--HIKICDFGLARQL-----TTFCGTPWYMAPEVL---GYGKCKCDWWSCGCILYEMLCGYPPFP---QMQMMFKKIG---- RDEWNSVLDQKLALPPQPEPLYNAVKLSLECTKVRGKDRPTMSEVAQ-----RLEEIL | . | .. ..||| |. | .. . . --------------------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF |
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TyrKc | LRR25_c.AA | TyrKc | 3-233 | 19 | 4.5e-12 | -27.44 | SMART | 1-280 (280) | Show / Hide |
Range on Protein: 3-233 Range on HMM: 1-280/280 Sequence Identity: 19% (60 aa) LS---------------------------DENRSEKMFEKELHLLGRA--HHSCLVNLIGYCEVD---------KLLVFEFMPRGTLSQNIYTKTPPLDW .. |. ...| .|. .. . || ..|.|.|.| . ..|.|.|| | | . . . | | . ITLGKKLGEGAFGEVYKGTWKIQVAVKMLKEDA-REDFMREARIMCKLGGHHPNIVRLYGVCTQQGRNFMYIEPLMIVMEYMPHGDLKDYLRKHRPKLCM VSRIRIAEQAARGLEYLHRYASPSIIHRDVKSSNILLDYNWNAHVSNFGLCSLEETQ-ASGTTITTPGYLDPEYGSCLR------------L-----TAK . .. |.|.| ||||. .|||| |.|.. | . .| |||. . ..| | .. ... . . | | KDLLSFCWQIACGMEYLHSK---NCIHRDLAARNCLVGENHTVKISDFGLSRDIYDDDQQG---ESKDYYRKKEHKGGKTMLPIRWMAPECINYGKFTTK SDVYSFGVVLLELLSGEKPIDSS-----RNIQDLAAWVLDLVGRDEWNSVLDQKLALPPQ---------PEPLYNAVKLSLECTKVRGKDRPTMSEVAQR |||.||||.. |... .. . . |.. ..| . . || |. .|. ..| . .||||.||. .. SDVWSFGVCMWEIFTYGQQPYPGMIQQMMSNQEVIEYVKQ-----------GYRMPQPPNDYPMSFVCCPDEMYQIM---KQCWHEDPEDRPTFSEIHEC L . F |
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Kinase | LRR25_c.AA | Pkinase_Tyr | 11-94 | 27 | 1.6e-10 | 36.27 | Pfam | 48-137 (270) | Show / Hide |
Range on Protein: 11-94 Range on HMM: 48-137/270 Sequence Identity: 27% (26 aa) KMFEKELHLLGRA-HHSCLVNLIGYCE-VDK----LLVFEFMPRGTLSQNIYTK---TPPLDWVSRIRIAEQAARGLEYLHRYASPSIIHRDV ..| .|. .. || .|.|.| | .. ..|.|.|| | | .. .||. . .. | |.|.|||.. .||||. EDFMREAKIMKQLGHHPNIVRLYGVCTDQGEPNQIYIVMEYMPHGDLLDYLRKHREDKQPLTMKDLLQMCWQIAKGMEYLESKN---CIHRDL |
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Kinase | LRR25_c.AA | Pkinase_Tyr | 142-165 | 52 | 0.000274 | 15.15 | Pfam | 190-214 (270) | Show / Hide |
Range on Protein: 142-165 Range on HMM: 190-214/270 Sequence Identity: 52% (13 aa) RLTAKSDVYSFGVVLLELLS-GEKP . | ||||.||||.. |... ||.| KFTTKSDVWSFGVLMWEIFTYGEQP |
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Kinase | LRR25_c.AA | Dicty4 | 223-235 | 46 | 0.000843 | 8.75 | In-house | 263-277 (277) | Show / Hide |
Range on Protein: 223-235 Range on HMM: 263-277/277 Sequence Identity: 46% (7 aa) RPTMSEVAQR--LEE ||...|. || ||. RPSFEEIIQRRILEH |
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Kinase | LRR25_c.AA | LRRK | 221-235 | 40 | 0.008763 | 5.66 | In-house | 337-351 (351) | Show / Hide |
Range on Protein: 221-235 Range on HMM: 337-351/351 Sequence Identity: 40% (6 aa) KDRPTMSEVAQRLEE |.||..|.. .||.. KKRPHFSQIVKRLSQ |
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Kinase | LRR25_c.AA | IRAK | 213-233 | 33 | 0.012823 | 5.3 | In-house | 297-317 (317) | Show / Hide |
Range on Protein: 213-233 Range on HMM: 297-317/317 Sequence Identity: 33% (7 aa) LECTKVRGKDRPTMSEVAQRL ..|. | . |..| .| |.| CCCGHHRANRRCDMAWVMQQL |
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Kinase | LRR25_c.AA | DRK | 223-235 | 53 | 0.040116 | 3.03 | In-house | 246-258 (258) | Show / Hide |
Range on Protein: 223-235 Range on HMM: 246-258/258 Sequence Identity: 53% (7 aa) RPTMSEVAQRLEE ||.| |. .||| RPSMQECLERLEA |
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Kinase | LRR25_c.AA | Dicty4-Unclassified | 221-233 | 46 | 0.051436 | 2.65 | In-house | 251-263 (263) | Show / Hide |
Range on Protein: 221-233 Range on HMM: 251-263/263 Sequence Identity: 46% (6 aa) KDRPTMSEVAQRL . |||| .. |.| NKRPTMNQIIQYL |
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Kinase | LRR25_c.AA | MLK | 221-233 | 30 | 0.101647 | 1.9 | In-house | 279-291 (291) | Show / Hide |
Range on Protein: 221-233 Range on HMM: 279-291/291 Sequence Identity: 30% (4 aa) KDRPTMSEVAQRL ..||..... | | HKRPSFRQIVQHL |
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Kinase | LRR25_c.AA | Pkinase_Tyr | 221-233 | 53 | 0.514944 | 4.06 | Pfam | 258-270 (270) | Show / Hide |
Range on Protein: 221-233 Range on HMM: 258-270/270 Sequence Identity: 53% (7 aa) KDRPTMSEVAQRL .||||.||. ..| EDRPTFSEIHEQL |