Gene YPL109C (Bakers Yeast)

YPL109C

Species: Bakers Yeast
Alias: YPL109C
External Links: Saccharomyces Genome Database Link
Annotation:

Classification

Group: Atypical
Family: ABC1
Subfamily: ABC1-C

Sequence

Name Sequence Type Origin Length Description Download
YPL109C.AA Protein Refseq_NP 543 Hypothetical ORF; Ypl109cp [Saccharomyces cerevisiae] Fasta, JSON

Protein domain

Protein domains of YPL109C.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase YPL109C.AA ABC1-C 205-353 41 3.1e-36 110.54 In-house 1-146 (307) Show / Hide 
Range on Protein: 205-353
Range on HMM: 1-146/307
Sequence Identity: 41% (62 aa)

CAIKILHPNVRSQIRRDLKIMKFCADAINWIPTMEWLSLPSEVDQFSILMNIQLDLRIEALNLERFNENFKNSIQVKFPKPFLPLSNRDVMFEEHVYGLS
 |.|.||| .  |.  || .||  .  .  .| . |||||  |. |  ||  |.||| || ||| |  ||.|   |||| |  |   |.|. |   |  |
VAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVE--TYEES

MEKFLSTKKQIN-DVELCKKVSDPFVDAFLQMLILDDFVHADLHPGNVII
.    |  .|    |.| .|.    .   |.|.  | ||||||||||...
VP--VSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILV
ABC1 YPL109C.AA ABC1 152-286 29 2.8e-29 100.73 Pfam 1-126 (126) Show / Hide 
Range on Protein: 152-286
Range on HMM: 1-126/126
Sequence Identity: 29% (41 aa)

QALKVDKIEDAFDEFNRTPIGVGSIAQVYVGELSQKYIDKYDNIQIGKDGNRWCAIKILHPNVRSQIRRDLKIMKFCADAINWIPTM---EWLSLPSEVD
..|  ...|. |.||...||. .|||||. ..|                  .. |.|..||.|.....||...|.. |.... ..      .. |   ||
EELG-CPWEEIFQEFDEEPIAAASIAQVHRARLKDD--------------GEEVAVKVQHPGVKKRMMRDIYNMRWMAKWVKRFFPGYRRQRFDLMWIVD

QFSILMNIQLDLRIEALNLERFNENFKNS---IQVKFPKPF
.|.. .   ||.| || | ||| |||..      |. || .
EFRKNLPWELDYRREAKNMERFRENFRHWHRQPWVYVPKVY
Kinase YPL109C.AA ABC1 206-286 27 9.6e-15 54.36 In-house 38-123 (123) Show / Hide 
Range on Protein: 206-286
Range on HMM: 38-123/123
Sequence Identity: 27% (24 aa)

AIKILHPNVRSQIRRDLKIMKFCADAINWIPT---MEWLSLPSEVDQFSILMNIQLDLRIEALNLERFNENFK--NSIQVKFPKPF
| |..||.|| ||. |.. |..  .. .| .    . |..|.  || |  ..  ..|...|| |.|.. ..||  .  ....|...
AVKVQHPGVREQIHYDINNMEMVVKMCDWFFPGPDFKWFFLMWFVDEFQKELPWECDFNNEARNAEKCRQLFKKFHWPFFYVPRIH
Kinase YPL109C.AA ABC1-B 152-179 46 1e-06 21.02 In-house 1-26 (125) Show / Hide 
Range on Protein: 152-179
Range on HMM: 1-26/125
Sequence Identity: 46% (13 aa)

QALKVDKIEDAFDEFNRTPIGVGSIAQV
. |   .||| | ||. .||.  |.|||
KDLG--NIEDVFSEFDQKPIAAASLAQV
Kinase YPL109C.AA ABC1 152-179 46 6e-05 16.66 In-house 1-26 (123) Show / Hide 
Range on Protein: 152-179
Range on HMM: 1-26/123
Sequence Identity: 46% (13 aa)

QALKVDKIEDAFDEFNRTPIGVGSIAQV
| |   ..|| | ||. .|..  |||||
QDLG--NWEDVFSEFDEKPFAAASIAQV
Kinase YPL109C.AA ABC1-B 206-227 36 0.001653 9.75 In-house 38-59 (125) Show / Hide 
Range on Protein: 206-227
Range on HMM: 38-59/125
Sequence Identity: 36% (8 aa)

AIKILHPNVRSQIRRDLKIMKF
| |. ||..| |.. |.. |..
AVKVQHPWLRKQFHYDMMMMEL
Kinase YPL109C.AA ABC1-C 409-532 37 2.3e-23 69.55 In-house 185-307 (307) Show / Hide 
Range on Protein: 409-532
Range on HMM: 185-307/307
Sequence Identity: 37% (46 aa)

IDTGIITELNEKNRINFIALFNALARFDGYRAGELMIERSRTPETAIDKEVFAFKVEKLVDKVKQRTFTLGTVSIGDLLDQMLSMVRSHHVRMESDFVSV
.| ||. ||      || | | |     | |  ||..   |  |   | | |   .  || . .. | ||  . .  ||  .  ..  | |..|| | |.
LDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARASE-CRDVEGFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLESNFASI

VVAILLLEGIGRQLDPNLDLFERF
| ||. |||.|| ||| ||. |  
VFAIMVLEGLGRSLDPKLDILEAA