Gene 30099 (Tetrahymena)

30099

Species: Tetrahymena
Alias: 1098, TTHERM_00945200, 30099, PreTt30099, 173.m00045
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Atypical
Family: ABC1
Subfamily: ABC1-A

Sequence

Name Sequence Type Origin Length Description Download
30099.AA Protein None 649 None Fasta, JSON
30099.kin_dom Protein Kinase Domain None 117 None Fasta, JSON
30099.NA RNA None 1950 None Fasta, JSON

Protein domain

Protein domains of 30099.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 30099.AA ABC1-A 327-524 44 1.5e-112 380.17 In-house 1-216 (216) Show / Hide 
Range on Protein: 327-524
Range on HMM: 1-216/216
Sequence Identity: 44% (97 aa)

FEEMPFAAASIGQVHRAVLIDGTKVAVKVQYPGVKESIDSDLNNLRRLMIYTGVFPKQMFLDRLIDYSRKELHEECNYTLEAEKQIKMYNFLKDDEDFTI
|||||||.|||||||.|||.||..||||.|||||.||||||.|||...|...|.|||.||||..|||.|.|||.||.|..||....|....|||...|..
FEEMPFACASIGQVHQAVLKDGREVAVKIQYPGVAESIDSDINNLMMVMNMSGMFPKGMFLDHFIDYARRELHWECDYQREARCMQKFRQLLKDWPFFYV

PRIIENLSTERIMVSELIEGDTIDYISENYPQELRDDIGRRLMKVTLK---------------ELFLFQTMQTDPNPSNYYFNRK----TNKLNLIDFGG
|..|  ..| |..  ||..|  ||   .  .||.|. |   .|.  |.               |.|..  |||||| .|  .. .    . |. | ||| 
PHVIDEYCTDRVLTMELMYGFPIDQCQGL-SQEIRNYICYNIMRLCLREVEYIFLSTFIIIDFEIFEWRFMQTDPNWANFFYDKHPKTGQHKVELLDFGA

VHTYSLEFMDKYIDVIY
   |  .| |.|. .| 
SREYGKDFTDHYMQIIK
Kinase 30099.AA ABC1 314-430 44 2.4e-72 246.66 In-house 1-123 (123) Show / Hide 
Range on Protein: 314-430
Range on HMM: 1-123/123
Sequence Identity: 44% (55 aa)

QELGENWKDNFQSFEEMPFAAASIGQVHRAVLIDGTKVAVKVQYPGVKESIDSDLNNLRRLMIYTGVFPKQ-----MFLDRLIDYSRKELHEECNYTLEA
|.|| ||.|.|..|.|.|||||||.|||||.|.||..||||||.|||.|.|..|.||..... ....|...     .||....|. .|||..||... ||
QDLG-NWEDVFSEFDEKPFAAASIAQVHRAKLKDGQTVAVKVQHPGVREQIHYDINNMEMVVKMCDWFFPGPDFKWFFLMWFVDEFQKELPWECDFNNEA

EKQIKMYNFLK--DDEDFTIPRII
... |.....|  ....|..|||.
RNAEKCRQLFKKFHWPFFYVPRIH
Kinase 30099.AA ABC1 314-430 36 2.4e-50 171.55 Pfam 1-126 (126) Show / Hide 
Range on Protein: 314-430
Range on HMM: 1-126/126
Sequence Identity: 36% (46 aa)

QELGENWKDNFQSFEEMPFAAASIGQVHRAVLID-GTKVAVKVQYPGVKESIDSDLNNLRRLMIYTGVFPKQ-----MFLDRLIDYSRKELHEECNYTLE
.||| .|.. ||.|.| |.|||||.|||||.| | | .||||||.||||.....|..|.|... ..  |..      ..|. ..|  ||.| .|..|..|
EELGCPWEEIFQEFDEEPIAAASIAQVHRARLKDDGEEVAVKVQHPGVKKRMMRDIYNMRWMAKWVKRFFPGYRRQRFDLMWIVDEFRKNLPWELDYRRE

AEKQIKMYNFLKDD---EDFTIPRII
|. . ..   ....   .....|...
AKNMERFRENFRHWHRQPWVYVPKVY
Kinase 30099.AA ABC1-B 314-369 48 6.7e-20 69.34 In-house 1-55 (125) Show / Hide 
Range on Protein: 314-369
Range on HMM: 1-55/125
Sequence Identity: 48% (27 aa)

QELGENWKDNFQSFEEMPFAAASIGQVHRAVLIDGTKVAVKVQYPGVKESIDSDLN
. || |  | |  |.. | ||||. |||||.| ||. ||||||.| ...... |..
KDLG-NIEDVFSEFDQKPIAAASLAQVHRAKLHDGETVAVKVQHPWLRKQFHYDMM