Gene SCYL3 (Sea Urchin)

SCYL3

Species: Sea Urchin
Alias: Spk191, SPU_008923, SCYL3
External Links: Sea Urchin Project Link
Annotation:

Classification

Group: Other
Family: SCY1

Sequence

Name Sequence Type Origin Length Description Download
SCYL3.AA Protein None 404 None Fasta, JSON
SCYL3.kin_dom Protein Kinase Domain None 27 None Fasta, JSON

Protein domain

Protein domains of SCYL3.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase SCYL3.AA SCY1 26-43 52 0.048531 2.97 In-house 1-19 (337) Show / Hide 
Range on Protein: 26-43
Range on HMM: 1-19/337
Sequence Identity: 52% (10 aa)

WKIHPA-KRPDGSRVSVFV
|||| . |. .|...||||
WKIHNGTKKYTGQECSVFV
Kinase SCYL3.AA SCY1 115-304 17 5e-34 115.23 In-house 47-337 (337) Show / Hide 
Range on Protein: 115-304
Range on HMM: 47-337/337
Sequence Identity: 17% (52 aa)

QLKVLRHPTILKFFASCNNVDS--TYLVTEQVKPLELVIEMLSP---------------------------------EEICAGMYNIIEALSFLHDRGGV
.||.||||.||........ .   .|...| ..||| | . ..                                   |.|.|...|..||||||... .
RLKRLRHPNILQYIHPLEESKDCMMYATEEIFQPLENVLKKWDNKKSCQTQKTQDVDFGQNTQPQRPYHKKDWKLDELEVCWGIFQILDALSFLHNDCHM

SHNNVCMSSIYVSCTDGGWRLGG---------MEHLCKFEDAT---LQFLNQSR-------------PLR-NSQAIPPEEKQDGVKTSIG----------
.|||.|..||.|   .| |..||         |.  |......   ..| .| .             . .  ....|. . ..    ...          
VHNNICPESIFVN-KNGDWKIGGDDDDAGGWGMDFVCDIQNGNPQMPWFPCQEWREMDYISVSSTKPDNKYPPPCQPNPDWLAPEYIHEDQHTPASYNWG

--PSMGHARDAYGFGALALTLLEYLG----DLGSI-------------------SSSFSANVEE------QFLNPDPKFRPKLKTLLPDEIF
  ..  .|.| ...|.|  ...  .     .. ..                   .. ..   |.       .|..||. ||.. ..| .. |
QEQKCTWASDMFSLGCLIWWVYNGKKPQITCNSNPYSTFHRYMEQWNAMSHCWWDHIPKELQEHLGHCYCHLLHQDPTCRPDPQQFLQHCYF
Kinase SCYL3.AA Pkinase 116-181 25 2e-06 23.55 Pfam 54-131 (293) Show / Hide 
Range on Protein: 116-181
Range on HMM: 54-131/293
Sequence Identity: 25% (20 aa)

LKVLRHPTILKFFASCNNVDSTYLVTEQVKP-LELVIEML-------------SPEEICAGMYNIIEALSFLHDRGGVSH
.| |.|| |.... .. . |. |.|.| .   |. |..               |..|..  || |...| ..|.. |. |
MKRLNHPNIVRLYDWFEDKDHIYMVMEYCEGGLY-VMDLFDYISTWRHGCFYFSEWECKFYMYQILRGLEYCHSM-GIIH
Kinase SCYL3.AA CAMK 116-181 13 0.000388 8.44 In-house 85-202 (425) Show / Hide 
Range on Protein: 116-181
Range on HMM: 85-202/425
Sequence Identity: 13% (16 aa)

LKV-------LRHPTILKFFASCN------------NVDS--------TYLVT---EQVKPLELVIEM------------------------LSPEEICA
.|        |.|| |.|..                . .          |.|.   | .   || ...                        .. .| . 
MKKLQGIGNKLDHPNIIKLYEVYEDPHYFKNTNDYET-SKQVFTKDKHMYMVMEIMEYCSGGELFDDLFDYIVEHGCYGEEFDQFDIVERGRFTEREARR

GMYNIIEALSFLHDRGGVSH
 .  |..|. ..|... . |
YFRQICSAVHYCHSHN-IVH
S_TKc SCYL3.AA S_TKc 53-304 13 0.000413 -116.63 SMART 1-231 (231) Show / Hide 
Range on Protein: 53-304
Range on HMM: 1-231/231
Sequence Identity: 13% (41 aa)

QDIYQHAANG-----FIAHNVKVSAQSQCKMHQENHPGIRFLHRHCADQKYGTSAFLQTILVFEDALQLKVLRHPTILKFFASCNNVDSTYLVTEQVKP-
 .| ..   |     . ....|   .  .|.                            . .      ||  .|| | |.. .. . |. |.|.| .   
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK--------------------------EHIRREIQILKK-HHPNIVKLYDVFQD-DHLYMVMEYCDGD

----LELVIEM--------LSPEEICAGMYNIIEALSFLHDRGGVSH-----NNVCMSSIYVSCTDGGWRLGGMEHLCKFEDATLQFLNQSRPLRNSQAI
    ...  ..        ... ...  || |..|| ..|.. |. |      |. ...                 .| |  |..               
LGDLFDYIKKRGRHGLRFPFPE-HARFYMYQICCALEYCHSH-GIIHRDLKPENILLDE--------------HIKICDFGLARQL--------------

PPEEKQDGVKTSIGPSM---------GH-ARDAYGFGALALTLLE----------YLGDLGSISSSFSANVEEQFLNPDPKFRPKLKTLLP-------DE
         .| .|            |. . | . .| .   .|            .  .|  |...     .. |. ||. ||    .|        ..
---------TTFCGTPWYMAPEVLGYGKCKCDWWSCGCILYEMLCGYPPFPQMQMMFKKIG--SPEAKD-FIRKCLQKDPEKRPTA-EALQDEWDIKCHP

IF
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WF