Gene 11892 (M.brevicollis)

11892

Species: M.brevicollis
Alias: 11892
External Links:
Annotation:

Classification

Group: TK-assoc
Family: SH2
Subfamily: SH2-R

Sequence

Name Sequence Type Origin Length Description Download
11892.AA Protein None 1171 None Fasta, JSON

Protein domain

Protein domains of 11892.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
TSP1 11892.AA TSP1 234-282 23 0.000542 14.89 SMART 1-66 (66) Show / Hide 
Range on Protein: 234-282
Range on HMM: 1-66/66
Sequence Identity: 23% (17 aa)

YGSWSSWS-CN-AACGSG-----TAARERS----CIPG------TCPGSCTAGQVDSEERDCYVT------P
 ..||.|| |  . ||.|     |  |.|.    |. .         ..|.      | |.| .       |
WWEWSEWSPCSGVTCGGGGRTEGTQTRTRTPIRMCCNPPPPRYQNGGQPCP------ETRPCNMQPNLQPCP
TSP1 11892.AA TSP1 285-340 22 0.004597 6.65 SMART 1-66 (66) Show / Hide 
Range on Protein: 285-340
Range on HMM: 1-66/66
Sequence Identity: 22% (16 aa)

WATWSPWSSCK-SDCGPIVAA--GQQRSR----PCVGECV---AAGLSKCTPGSVDASQRACGGA------S
| .||.||.|    ||  .     |.|.|    .|.         | . |.       .|.| .       .
WWEWSEWSPCSGVTCGGGGRTEGTQTRTRTPIRMCCNPPPPRYQNGGQPCP------ETRPCNMQPNLQPCP
TSP1 11892.AA TSP1 341-387 28 0.010086 3.62 SMART 1-66 (66) Show / Hide 
Range on Protein: 341-387
Range on HMM: 1-66/66
Sequence Identity: 28% (19 aa)

WNPWNIASPCSQSTCGSG-----QQTWSRS----CSL-------DGTEQESDSRPCVSG---APAT
| .|   ||||  |||.|      || .|.    | .        | .. ...|||      .|  
WWEWSEWSPCSGVTCGGGGRTEGTQTRTRTPIRMCCNPPPPRYQNGGQPCPETRPCNMQPNLQPCP
SH2 11892.AA SH2 1004-1096 25 7.2e-05 17.59 SMART 1-87 (87) Show / Hide 
Range on Protein: 1004-1096
Range on HMM: 1-87/87
Sequence Identity: 25% (25 aa)

TDVFFNLIVCLTRCPDSERARRWLQAP-GGSGCFLIRPSASGEASMRALSFIDSKKALQQERIHQRADGRFAILN---MDFASLGALVEHFCQHDLY
   ..  |       . | | . |..| .  |.||.|.| | ..   .||. .  .  .  ||.. .||.. |     . | ||  ||.|. .. |.
QPWYHGNI-------SREEAEQLLKNPGMPDGDFLVRDSES-NPGDYVLSVRWK-GKVKHYRIRRNDDGKYYIDETWRRKFPSL-ELVNHYQHNPLG