Gene 33853 (M.brevicollis)

33853

Species: M.brevicollis
Alias: 33853
External Links:
Annotation:

Classification

Group: TK-assoc
Family: SH2
Subfamily: Unique

Sequence

Name Sequence Type Origin Length Description Download
33853.AA Protein None 874 None Fasta, JSON

Protein domain

Protein domains of 33853.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

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Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
SH2 33853.AA SH2 538-619 22 0.000435 9.24 SMART 1-87 (87) Show / Hide 
Range on Protein: 538-619
Range on HMM: 1-87/87
Sequence Identity: 22% (20 aa)

PLWLHENISEGQAATLLAG--TAPGTFVVRA-LPRDRQFALTVSADNAIHVYHLAMADDLSWMIED---IPIDGAVSLVSTVAILNAA
  | | |||  .|  || .    .|.|.||   .  ....|.|  .. .. |..   || .. |..    . .    ||         
QPWYHGNISREEAEQLLKNPGMPDGDFLVRDSESNPGDYVLSVRWKGKVKHYRIRRNDDGKYYIDETWRRKFPSL-ELVNHYQHNPLG
PDZ 33853.AA PDZ 709-789 20 6.1e-12 43.48 Pfam 1-86 (86) Show / Hide 
Range on Protein: 709-789
Range on HMM: 1-86/86
Sequence Identity: 20% (18 aa)

TVVIERR-RGESWGITLRTVAGE---LGTMVAGVDPG-SPADCGG-LKFGDVFLRIDDQVVAHSSHHDIKSSLRAATKATVVSLGLQ
.|..|.. .....|.... . ..    |  .. | || ..|..|| .. ||. ..|..| ..  .| ...  .. . . ..|.| .|
QVTLEKQDKRGGLGFSIKGGNDQRHDQGIYISEVMPGSGAAERGGRIHEGDQIISINGQDIRNMTHDRAVQAIKGSKG-GEVHLTIQ
PDZ 33853.AA PDZ 718-792 24 1.6e-11 45.56 SMART 1-80 (80) Show / Hide 
Range on Protein: 718-792
Range on HMM: 1-80/80
Sequence Identity: 24% (21 aa)

ESWGITLRTVAGELGTMVAGVDPGSPADCGG------LKFGDVFLRIDD-QVVAHSSHHDIKSSLRAATK---ATVVSLGLQIPG
...|....      |  ...| ||.||.  |      |. ||. |.... |.|   .| ..   |... .    ..|.| .| ||
GGLGFSIVG-----GIFISSVVPGGPAEKAGRNTRGHLRPGDRILEVNGQQPVENMTHEQAVDMLKQCGGGGIGDKVTLTVQRPG