Gene 33313 (M.brevicollis)

33313

Species: M.brevicollis
Alias: 33313
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTB
Subfamily: SHC-like

Sequence

Name Sequence Type Origin Length Description Download
33313.AA Protein None 363 None Fasta, JSON

Protein domain

Protein domains of 33313.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
PID 33313.AA PID 37-188 24 1e-25 92.06 Pfam 1-153 (153) Show / Hide 
Range on Protein: 37-188
Range on HMM: 1-153/153
Sequence Identity: 24% (40 aa)

YPVKYLGKIPFAMSMRTMRFEDRTAVTREAIQLVSETVGVVDPVTRQATPLMKRTLVEDPVAMNLNVRLKISVTGLTIQVIET---GEIIGTHIVPSISF
. |.||| .. . .||.  .. |.....|.|. |.. |.            ..| . ..  ..  .. |.||  |...  ..|   .|.. .| ...|||
FEVRYLGCVEVPCHMRRPDKNTRMMQCQECIHRVCMQVP-------AKKINKIRGHRGHWQHW-QKIDLHISTDGVKWIDEKTEAEQECMHDHPMRNISF

ATG--DRPNTYERIGY-IAKDQRNN-RECHVFDCGS--RANEIMVTIGQAFELRYKSFLAK
. .  |.  .  . .| |..| . . . |||| |     | .| .|.||||...|. .| .
CADGGDPHVDMRYFAYDICRDGPCQRFACHVFWCCKTQQAQDIAQTVGQAFQVCYQQCLRA
PTB 33313.AA PTB 32-191 20 1.3e-21 79.06 SMART 1-156 (156) Show / Hide 
Range on Protein: 32-191
Range on HMM: 1-156/156
Sequence Identity: 20% (37 aa)

PDGIVYPVKYLGKIPFAMSMRTMRFEDRTAVTREAIQLVSETVGVVDPVTRQATPLMKRTLVEDPVAMNLNVRLKISVTGLTIQVIETGEIIGTHIVPSI
|.|  . |.||| .. ..... | ......| .|... ..                         .  . .. |.||| |...   .|...| .| ...|
PWGCCFNVWYLGCVEVPHHRNSMAPGKGMQVCQECMRKIR-----------------------QHWKHWQKMHLHISVDGVKLIDPQTKQVIHHHPIHRI

SFATGDR----------PNTYERIGYIAKDQRN--------NRECHVFDCGSRA-NEIMVTIGQAFELRYKSFLAKGQR
||.  |.          . .    |||.... .         ..|||| | . . ..|. ||||||...|. .... . 
SFCAHDPYRWNTGGHHCCDDDRCFGYICRHPNDRGSHRMTYWFRCHVFWCEDPHAEDIAQTIGQAFQVCYQQCQKQRCQ