Gene 13000 (M.brevicollis)

13000

Species: M.brevicollis
Alias: 13000
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTB
Subfamily: Unique

Sequence

Name Sequence Type Origin Length Description Download
13000.AA Protein None 470 None Fasta, JSON

Protein domain

Protein domains of 13000.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
PTB 13000.AA PTB 19-155 21 1.9e-22 81.79 SMART 1-156 (156) Show / Hide 
Range on Protein: 19-155
Range on HMM: 1-156/156
Sequence Identity: 21% (35 aa)

HGLRLFYVKYYGHEEVPDAR-------GNSVVDFALHSILTTKTYRKSQGWHPPQVELSVGTRGVKVTDRTTGTVFLDLPLRNISYCQDDR---------
     |.|.| |  ||| .|       |. |.. ... |        . . |.  . |..  .|||..|. |..| .. |...||.| .|.         
PWGCCFNVWYLGCVEVPHHRNSMAPGKGMQVCQECMRKIR-------QHWKHWQKMHLHISVDGVKLIDPQTKQVIHHHPIHRISFCAHDPYRWNTGGHH

--RGNNIFCFIAKEELSS-------PKRCYAFKSYNQA-AEIMHVIGDAFKRAAQEHGQNGGS
  . ...|..|.... ..       . ||..|.. . .  .|.. ||.||. ..|.. ..  .
CCDDDRCFGYICRHPNDRGSHRMTYWFRCHVFWCEDPHAEDIAQTIGQAFQVCYQQCQKQRCQ
PID 13000.AA PID 24-152 24 1.7e-13 49.18 Pfam 1-153 (153) Show / Hide 
Range on Protein: 24-152
Range on HMM: 1-153/153
Sequence Identity: 24% (37 aa)

FYVKYYGHEEVPDARG----N---SVVDFALHSILTT--------KTYRKSQGWHPPQVELSVGTRGVKVTDRTT---GTVFLDLPLRNISYCQD--DRR
| |.| |. ||| ...    |    ..  ..| .           .  . ... |.  . |.. |.|||..|  |   . .  | |.||||.| |  |..
FEVRYLGCVEVPCHMRRPDKNTRMMQCQECIHRVCMQVPAKKINKIRGHRGHWQHWQKIDLHISTDGVKWIDEKTEAEQECMHDHPMRNISFCADGGDPH

-GNNIFCF-IAKEELSSPKRCYAFKSYN--QAAEIMHVIGDAFKRAAQEHGQN
  . .| . |...  ..  .|..|..    || .| . .|.||  . |.. . 
VDMRYFAYDICRDGPCQRFACHVFWCCKTQQAQDIAQTVGQAFQVCYQQCLRA