Gene CC1G_09374 (C.cinerea)

CC1G_09374

Species: C.cinerea
Alias: CC1G_09374
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_09374.AA Protein None 808 None Fasta, JSON
CC1G_09374.NA RNA None 2427 None Fasta, JSON
CC1G_09374.kin_dom Protein Kinase Domain None 469 None Fasta, JSON

Protein domain

Protein domains of CC1G_09374.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_09374.AA IKK 538-588 32 3.1e-05 14.1 In-house 118-169 (297) Show / Hide 
Range on Protein: 538-588
Range on HMM: 118-169/297
Sequence Identity: 32% (17 aa)

ILKQCVIALQIMF-CAGWVHRDISAGNILALRGKRGKWQVKLSDLEYAKRFP
....|. ..  .    | |||||  |||  ..|  ||   |. |..||.. .
VCRDCCAGMHHLHSQNGIVHRDIKPGNIMCQKGEDGKTIYKITDFGYAREWD
Kinase CC1G_09374.AA TAO 538-611 35 0.000258 9.68 In-house 104-168 (254) Show / Hide 
Range on Protein: 538-611
Range on HMM: 104-168/254
Sequence Identity: 35% (26 aa)

ILKQCVIALQIMFCAGWVHRDISAGNILALRGKRGKWQVKLSDLEYAKRFPSNAPASSQPKTGTPYFMPLEILM
| .. . .|. .     .|||| |||||       . ||||.|   |      .|| |    ||||.|  |...
ICHGALQGLRYLHSHKMIHRDIKAGNILLTE----HGQVKLADFGSASMV---CPANSF--VGTPYWMAPEVIL
S_TKc CC1G_09374.AA S_TKc 407-695 12 0.000335 -115.3 SMART 1-231 (231) Show / Hide 
Range on Protein: 407-695
Range on HMM: 1-231/231
Sequence Identity: 12% (41 aa)

WRQREIL------SAFSAESKRTLGT-ALKDFKKYFSCAIRQHSGHPGLEVSPKARAVPNIFPVYTPPPEQPLGTTVRHMSGTQSALEQARMKKSTRNKP
..  ...      . . .  |.|    |.|  |                                                  ....   .. |.  . |
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK--------------------------------------------------EHIRREIQILKK--HHP

SEIKADPDSLTPRRPCRVLFENVCT---PLHDIPTLG-----------EAIDILKQCVIALQIMFCAGWVHRDISAGNILALRGKRGKWQVKLSDLEYAK
  .|      .      . .| . .    |.|.               .|  ...| . ||. .   | .|||.   |||  .      ..|..|   |.
NIVKLYDVFQD--DHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHARFYMYQICCALEYCHSHGIIHRDLKPENILLDE------HIKICDFGLAR

RFPSNAPASSQPKTGTPYFMPLEILMKTLLVRPEYDR-----------VINMGIERTPTIVAPRIVIHGFQHDLESVWWIILWLITMRVAEDLPRKFGKR
..            |||..|. |.|         |..           .. |   ..|              ... .. .|.         .  . | ..
QL--------TTFCGTPWYMAPEVL--------GYGKCKCDWWSCGCILYEMLCGYPPFP------------QMQMMFKKIG--------SPEAKDFIRK

VFRNNPM--VGARKAVLDE-----MELY
 .. .|    .| .|  ||     ..  
CLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase CC1G_09374.AA STE 555-612 24 0.000993 9.19 In-house 174-236 (359) Show / Hide 
Range on Protein: 555-612
Range on HMM: 174-236/359
Sequence Identity: 24% (18 aa)

VHRDISAGNILALRGKRGKWQVKLSDLEYAKRFPSNAP-----------ASSQPKT----GTPYFMPLEILMK
.|||| ..|||          |||.|   .... .. .           ...| |.    ||| .|  |....
IHRDIKPANILL---------VKLCDFGVCGQLTDSMANIQSNNIIDCIETMQQKRNTFVGTP-WMAPEVIQQ