Gene CC1G_09375 (C.cinerea)

CC1G_09375

Species: C.cinerea
Alias: CC1G_09375
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_09375.AA Protein None 752 None Fasta, JSON
CC1G_09375.NA RNA None 2259 None Fasta, JSON
CC1G_09375.kin_dom Protein Kinase Domain None 416 None Fasta, JSON

Protein domain

Protein domains of CC1G_09375.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_09375.AA SLK 402-476 33 4.4e-05 12.96 In-house 102-170 (259) Show / Hide 
Range on Protein: 402-476
Range on HMM: 102-170/259
Sequence Identity: 33% (25 aa)

ILKQCVIALRLMFCAGWVHRDISTGNILSTRSGSGQRWQVKLSDLEYSKKFPDTSHPEDEHMMGTPFFMPCEIQM
. |. . ||. .     .|||.  |||| |  |     .|.| |   | |   | .  |   .|||..|  |. |
VCKHMCEALNWLHSNKVIHRDLKAGNILMTMDG-----DVRLADFGVSAKNKHTMQKRDT-FIGTPYWMAPEVVM
S_TKc CC1G_09375.AA S_TKc 247-571 10 0.000114 -108.45 SMART 1-231 (231) Show / Hide 
Range on Protein: 247-571
Range on HMM: 1-231/231
Sequence Identity: 10% (39 aa)

YHSLELLSHYPSTSLGDRTARIWRAVQVLSPDNRRRVAGTPDRVLKDVWVDAEMRTEAEIQEDLFRDIKAVTTDVDWRKRPIFQDFLERDVESLAEALQG
|. |... .          .. .... .      |.||      .| .                                    . ..| .. | .  . 
YEILRKIGKG-------AFGKVYKCRHKK---TGRIVA------IKIIK-----------------------------------EHIRREIQILKK--HH

DNFKRYFSCIVAKYVAQLDTRATSTTSPSKRRCFFVYESVCT---PLHDISTFG-----------EVIDILKQCVIALRLMFCAGWVHRDISTGNILSTR
.|  ... ...                    . ..| | . .    |.|.               ..  ...| . ||  .   | .|||.   ||| ..
PNIVKLYDVFQD------------------DHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHARFYMYQICCALEYCHSHGIIHRDLKPENILLDE

SGSGQRWQVKLSDLEYSKKFPDTSHPEDEHMMGTPFFMPCEIQMERHVFPINPERERSQRYPK------------------RPVVYGYQHDLESIWWIIL
       ..|..|   ....         .. |||..|. |.                  | |                  .|  .    ... .. .|.
-------HIKICDFGLARQL--------TTFCGTPWYMAPEVL----------------GYGKCKCDWWSCGCILYEMLCGYPPFP----QMQMMFKKIG

WFATMRVDQDLCPKFGRLHFQQPMNEYCTDR---RWLLFRDPSHLATVPLLDD----ALPSELL
                              .   | .| .||..  |.  .      .   . .
--------------------------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase CC1G_09375.AA STE 419-470 25 0.000127 12.39 In-house 174-229 (359) Show / Hide 
Range on Protein: 419-470
Range on HMM: 174-229/359
Sequence Identity: 25% (17 aa)

VHRDISTGNILSTRSGSGQRWQVKLSDLEYSKKFPD---------------TSHPEDEHMMGTPFFM
.||||  .|||           |||.|   .... |               |.  .  .. ||| .|
IHRDIKPANILL----------VKLCDFGVCGQLTDSMANIQSNNIIDCIETMQQKRNTFVGTP-WM
Kinase CC1G_09375.AA IKK 397-454 27 0.000205 11.21 In-house 113-170 (297) Show / Hide 
Range on Protein: 397-454
Range on HMM: 113-170/297
Sequence Identity: 27% (16 aa)

GEVIDILKQCVIALRLMF-CAGWVHRDISTGNILSTRSGSGQRWQVKLSDLEYSKKFPD
.|.  ....|. .....    | |||||  |||   ... |..   |. |..| .. .|
HEFLQVCRDCCAGMHHLHSQNGIVHRDIKPGNIMCQKGEDGKTIY-KITDFGYAREWDD
Kinase CC1G_09375.AA NEK8 398-434 28 0.00046 7.36 In-house 120-157 (278) Show / Hide 
Range on Protein: 398-434
Range on HMM: 120-157/278
Sequence Identity: 28% (11 aa)

EVIDILKQCVIALRLMFCAGWVHRDISTGNILSTRS-G
.... . | ..|.. |  .. .|||. | ||. ||. .
MILWYFFQMCSAVHHMHQHNILHRDLKTQNIFMTRHRM
Kinase CC1G_09375.AA TAO 398-474 34 0.000492 8.75 In-house 100-166 (254) Show / Hide 
Range on Protein: 398-474
Range on HMM: 100-166/254
Sequence Identity: 34% (27 aa)

EVIDILKQCVIALRLMFCAGWVHRDISTGNILSTRSGSGQRWQVKLSDL-EYSKKFPDTSHPEDEHMMGTPFFMPCEI
|.  | .. . .|| .     .||||  |||| |  |     ||||.|    | . |  |       .|||..|  |.
EIAAICHGALQGLRYLHSHKMIHRDIKAGNILLTEHG-----QVKLADFGSASMVCPANS------FVGTPYWMAPEV