Gene CC1G_15127 (C.cinerea)

CC1G_15127

Species: C.cinerea
Alias: CC1G_15127
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_15127.AA Protein None 874 None Fasta, JSON
CC1G_15127.NA RNA None 2625 None Fasta, JSON
CC1G_15127.kin_dom Protein Kinase Domain None 458 None Fasta, JSON

Protein domain

Protein domains of CC1G_15127.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_15127.AA TKL 548-612 17 7.4e-05 13.44 In-house 162-269 (364) Show / Hide 
Range on Protein: 548-612
Range on HMM: 162-269/364
Sequence Identity: 17% (19 aa)

VHRDISTGNVLAFRT---------SPNDRWQVKLSDLEYAKRFPRDKDGAC-----------------TDPKTGTPFFMACEV-----------------
.|||. . |.| ..          .||. | .|..|.  .... ....  .                 | .. ||| .|| ||                 
IHRDLKSKNILVDENWTNVSNYMYNPNADWCCKICDFGLSRFMSQSGNMNDTMTTMMESAEHQNNRKTTMTQCGTPRWMAPEVLRGQMNYTEKVGIDEFC

QTRQYFTR
. ..|...
KGFEYSEK
Kinase CC1G_15127.AA RTKF 546-574 51 0.00017 10.11 In-house 126-152 (272) Show / Hide 
Range on Protein: 546-574
Range on HMM: 126-152/272
Sequence Identity: 51% (15 aa)

GWVHRDISTGNVLAFRTSPNDRWQVKLSD
| ||||.   ||| |   |  | .|||.|
GLVHRDVAARNVLVFEDQP--RMYVKLTD
Kinase CC1G_15127.AA TAO 527-604 32 0.000806 8.04 In-house 100-166 (254) Show / Hide 
Range on Protein: 527-604
Range on HMM: 100-166/254
Sequence Identity: 32% (25 aa)

EFSDILKQGLTPLRLMFCAGWVHRDISTGNVLAFRTSPNDRWQVKLSDLEYAKRFPRDKDGACTDPKTGTPFFMACEV
|   | .. |  || .     .||||  ||.|       .. ||||.|   |         .  .   |||..|| ||
EIAAICHGALQGLRYLHSHKMIHRDIKAGNILL-----TEHGQVKLADFGSASMV------CPANSFVGTPYWMAPEV