Gene CC1G_15855 (C.cinerea)

CC1G_15855

Species: C.cinerea
Alias: CC1G_15855
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_15855.AA Protein None 769 None Fasta, JSON
CC1G_15855.NA RNA None 2310 None Fasta, JSON
CC1G_15855.kin_dom Protein Kinase Domain None 439 None Fasta, JSON

Protein domain

Protein domains of CC1G_15855.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_15855.AA SLK 418-490 31 5e-06 16.25 In-house 102-168 (259) Show / Hide 
Range on Protein: 418-490
Range on HMM: 102-168/259
Sequence Identity: 31% (23 aa)

VLRQCLTAMRLMYCAGWIHRDISVGNILAIRSGPEAPWEMKLSDLEFARKFLDPEIQKDEKPIGTPFFMACEL
| .. . |.. ..    ||||.  ||||    |     ...| |   . |    ..|| .  ||||..|| |.
VCKHMCEALNWLHSNKVIHRDLKAGNILMTMDG-----DVRLADFGVSAKNKH-TMQKRDTFIGTPYWMAPEV
Kinase CC1G_15855.AA KHS 418-492 33 5e-06 16.18 In-house 101-169 (258) Show / Hide 
Range on Protein: 418-492
Range on HMM: 101-169/258
Sequence Identity: 33% (25 aa)

VLRQCLTAMRLMYCAGWIHRDISVGNILAIRSGPEAPWEMKLSDLEFARKFLDPEIQKDEKPIGTPFFMACELQA
| |. |.... .   | .||||   |||   .|     ..|| |   . . .   | |    ||||..|| |  |
VCRETLQGLHYLHSMGKMHRDIKGANILLTDQG-----DVKLADFGVSAQ-ITATIAKRKSFIGTPYWMAPEVAA
S_TKc CC1G_15855.AA S_TKc 259-559 11 9.6e-05 -107.33 SMART 1-231 (231) Show / Hide 
Range on Protein: 259-559
Range on HMM: 1-231/231
Sequence Identity: 11% (38 aa)

FHSDDPVGR--SARVWKVKQVVSPTDLNRVPETCDRILKDVSLDARMKPEVDIQRQLFADIAAFGKRPDWRSADVLKDMRQEDIGTLMDALDGENFKKYF
..  ...|.   ..|.|.. .                .| ..                                   .. .  |  |.   . .|  |..
YEILRKIGKGAFGKVYKCRHKK---------TGRIVAIKIIK-----------------------------------EHIRREIQILKK--HHPNIVKLY

SCIIASHVGKPYSCPARSQSQSLPFGDGPSPTYVPK--RQCFYLYEFICT-PLYDIPTLGEAIDVLRQCLTAMRLMYCAGWIHRDISVGNILAIRSGPEA
 ..               ..  . .       |..      | . .   . .|.   .  .|  ...| . |.  .   | ||||.   |||  .     
DVFQD-------------DHLYMVM------EYCDGDLGDLFDYIKKRGRHGLRFPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE-----

PWEMKLSDLEFARKFLDPEIQKDEKPIGTPFFMACELQAGTPILP-----------------DEIPASDYELDSSPESEDWEPSGPILHNFQHEIESMWW
  . |..|  .||..           .|||..|| |.    .  .                  . | .                  ....     .... 
--HIKICDFGLARQL--------TTFCGTPWYMAPEVL---GYGKCKCDWWSCGCILYEMLCGYPPFP--------------QMQMMFKKIG--SPEAKD

IILWLLT--ARVRGSAWHEFS-------KHFF
.|  .|.   . | .|   .          .|
FIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase CC1G_15855.AA Ciliate-E2 435-487 21 0.000383 10.1 In-house 183-255 (365) Show / Hide 
Range on Protein: 435-487
Range on HMM: 183-255/365
Sequence Identity: 21% (18 aa)

IHRDISVGNILAIRSGPEAPWEMKLSDLEFARKFLDP----------EIQKDEK---------------------PIGTPFFMA
|||||   |||            |..|. ...|. |.          .. .. |                      .||| .||
IHRDIKPENILF----------IKIIDFGLSKKYDDDNQNRTHKQQCKWYMF-KNDTSRTPGYMDQIIQQNMFNTICGTPGYMA
Kinase CC1G_15855.AA TTBKL 421-439 52 0.000404 9.89 In-house 110-128 (288) Show / Hide 
Range on Protein: 421-439
Range on HMM: 110-128/288
Sequence Identity: 52% (10 aa)

QCLTAMRLMYCAGWIHRDI
||| |...|  .|.||||.
QCLYALKQMHDCGFIHRDV
Kinase CC1G_15855.AA TAO 418-489 31 0.0009 7.88 In-house 104-165 (254) Show / Hide 
Range on Protein: 418-489
Range on HMM: 104-165/254
Sequence Identity: 31% (23 aa)

VLRQCLTAMRLMYCAGWIHRDISVGNILAIRSGPEAPWEMKLSDLEFARKFLDPEIQKDEKPIGTPFFMACE
. .. | ..| .     |||||  ||||    |      .||.|   |  . .|     .  .|||..|| |
ICHGALQGLRYLHSHKMIHRDIKAGNILLTEHG-----QVKLADFGSA-SMVCPA----NSFVGTPYWMAPE