Gene CC1G_01353 (C.cinerea)

CC1G_01353

Species: C.cinerea
Alias: CC1G_01353
External Links:
Annotation:

Classification

Group: Other
Family: Haspin

Sequence

Name Sequence Type Origin Length Description Download
CC1G_01353.AA Protein None 835 None Fasta, JSON
CC1G_01353.NA RNA None 2508 None Fasta, JSON
CC1G_01353.kin_dom Protein Kinase Domain None 281 None Fasta, JSON

Protein domain

Protein domains of CC1G_01353.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_01353.AA Haspin 452-624 30 4.2e-16 54.3 In-house 1-179 (264) Show / Hide 
Range on Protein: 452-624
Range on HMM: 1-179/264
Sequence Identity: 30% (57 aa)

EFRKIGEASYSEVFGI----ADVVLKVIPLRDESA--PGAISTELEEGPPPSDAQDVRKEIIVTRAMGEVYG--------GFVKFLKTYIVRGKYPELLL
  .||||  | ||| .     .||.|.||.....    | .  |   .     .... .|||... || .          .|...    .| ||.. .|.
NCKKIGEGCYGEVFSVTWNGKEVVMKIIPIHWSCCKYYGEYCGEHQQT-----NDEALNEIIIMKKMGKLSHRNMCPNFPNFCGMCVVTQVPGKCCKKLN

NLWDEYNETKGSESMRPDTFKLSQVYAIIVLPNGGPDLEAY--SFNNPTKQGWKQACSIFWQVAKSLAHAEHLVSFEHRDLHWGQILVK
 .||.|. |..||  ||| ||  |.. .... .|| .|.     ||..      | .||. |   |.. |.    |.|.||||| .|.|
KMWDHYCYTHHSENDRPDFFKKNQLHIHWIMEYGGRPLDNFRWKFNTC-----NQCISIMCQLVMSMYIAKDEMQFWHNDLHWGNVLIK
Kinase CC1G_01353.AA DUF3635 687-741 40 1.3e-20 72.69 Pfam 1-66 (121) Show / Hide 
Range on Protein: 687-741
Range on HMM: 1-66/121
Sequence Identity: 40% (27 aa)

EEVFMGEG---------EYQFDVYRMMRDHTGD--DWEGYHPLTNVMWLHYLATKLLYGKGLKAPV
.. | |.|          ||||.|||||  .    .|  .|| |||.|||||  |||  ...|...
HDFFQGKGKSKINEYQYDYQFDIYRMMRKMLKNPICWSQFHPMTNVLWLHYLIHKLLHKMKFKSIC
Kinase CC1G_01353.AA Haspin 653-721 36 2.7e-10 33.38 In-house 199-264 (264) Show / Hide 
Range on Protein: 653-721
Range on HMM: 199-264/264
Sequence Identity: 36% (25 aa)

KSHGVQTTIIDLGLSRMDAGDGSGGYRVQWTPFDEEVFMGEGEYQFDVYRMMRDHTGDDWEGYHPLTNV
|||||. ||||...|| . ..  .   .    .||..|.. . |||||||.||      |. .|.....
KSHGVMVTIIDFCKSRCGKDNKKIYWDWK---NDETMFEQFWDYQFDVYRDMRKNCQHFWFVHHAKNWK