Gene CAMK1c-S1_f (S.moellendorffii)

CAMK1c-S1_f

Species: S.moellendorffii
Alias: CAMK1c-S1_f
External Links:
Annotation:

Classification

Group: CAMK
Family: CAMK1
Subfamily: CAMK1c

Sequence

Name Sequence Type Origin Length Description Download
CAMK1c-S1_f.AA Protein None 251 None Fasta, JSON
CAMK1c-S1_f.NA RNA None 756 None Fasta, JSON
CAMK1c-S1_f.kin_dom Protein Kinase Domain None 88 None Fasta, JSON

Protein domain

Protein domains of CAMK1c-S1_f.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Pkinase CAMK1c-S1_f.AA Pkinase 136-236 24 1.1e-16 60.07 Pfam 35-142 (293) Show / Hide 
Range on Protein: 136-236
Range on HMM: 35-142/293
Sequence Identity: 24% (27 aa)

VERSTTLEDQAEL--EIRVLTKLSKSKERSGVVQLVDVFKDEDHYFLLMDLCQC-----SLTEVLL--KKKKL--SEHEAAVVIKNVARTVGKMHDMGMA
....   . .. .  ||... .| ...    .|.| |.| |.||. . |..|..     .| ...   .....  ||.|.  ... ..| .  .|.||  
RHEKSWKDQTHRRLSEIQIMKRL-NHPN---IVRLYDWFEDKDHIYMVMEYCEGGLYVMDLFDYISTWRHGCFYFSEWECKFYMYQILRGLEYCHSMGII

HRDIKTDNILLV
|||.| .|||..
HRDLKPENILID
Kinase CAMK1c-S1_f.AA MNK 160-234 35 5.6e-15 47.98 In-house 55-130 (292) Show / Hide 
Range on Protein: 160-234
Range on HMM: 55-130/292
Sequence Identity: 35% (27 aa)

KERSGVVQLVDVFKDEDHYFLLMDLCQ-CSLTEVLLKKKKLSEHEAAVVIKNVARTVGKMHDMGMAHRDIKTDNIL
.   ...||.. | |.| ..| .   .  .|    ...|  .|||| .|||..|     ||. | ||||.|  |||
QGHRNILQLIEWFEDDDRFYLVFEKMRGGPLLQHIQQRKHFTEHEASQVIKDIASALDFMHNKGIAHRDLKPENIL
Kinase CAMK1c-S1_f.AA CAMK 137-236 17 1.9e-14 42.26 In-house 69-213 (425) Show / Hide 
Range on Protein: 137-236
Range on HMM: 69-213/425
Sequence Identity: 17% (25 aa)

ERSTTLEDQAELEIRVLTKLSKSKE---RSGVVQLVDVFKD-------------------EDHYFLLM---DLCQC-----SLTEVLLKK----------
.|.   ... . ||... ||.. ..      ...| .|. |                   ..|... |   ..|.       | . . ..          
WRRPKDRKNVRREIEIMKKLQGIGNKLDHPNIIKLYEVYEDPHYFKNTNDYETSKQVFTKDKHMYMVMEIMEYCSGGELFDDLFDYIVEHGCYGEEFDQF

-----KKLSEHEAAVVIKNVARTVGKMHDMGMAHRDIKTDNILLV
     ....|.||. ... ..  |  .|... .|||.| .||||.
DIVERGRFTEREARRYFRQICSAVHYCHSHNIVHRDLKPENILLD
Kinase CAMK1c-S1_f.AA RSK 165-235 33 7.5e-14 47.34 In-house 63-137 (278) Show / Hide 
Range on Protein: 165-235
Range on HMM: 63-137/278
Sequence Identity: 33% (25 aa)

VVQLVDVFKDEDHYFLLMDLCQ-CSLTEVLLKKKK---LSEHEAAVVIKNVARTVGKMHDMGMAHRDIKTDNILL
.|.| ..|..|.. .| |..|    |.. |.|.|    .||.||.... ... .|  .|. |  |||.| .|||.
IVTLHYAFQTEGKLYLIMEYCRGGELFTHLQKEKHFGCFSEDEACFYMAEIVLAVEHLHQQGIIHRDLKPENILY
Kinase CAMK1c-S1_f.AA RSK 165-236 35 1.8e-13 44.63 In-house 63-135 (271) Show / Hide 
Range on Protein: 165-236
Range on HMM: 63-135/271
Sequence Identity: 35% (26 aa)

VVQLVDVFKDEDHYFLLMDLCQ-CSLTEVLLKKKKLSEHEAAVVIKNVARTVGKMHDMGMAHRDIKTDNILLV
.|.| .|| || . .. ||...   |   |||.| .|| |.. .  ..|... . |  | .||| | .|||..
IVKLHYVFQDEGKVYMIMDFMRGGDLFDRLLKQKMFSEREVKFYMAEIALAMEYLHSQGIVHRDLKPENILYD
Kinase CAMK1c-S1_f.AA CAMK-Unique 166-235 17 2.1e-13 40.43 In-house 79-190 (363) Show / Hide 
Range on Protein: 166-235
Range on HMM: 79-190/363
Sequence Identity: 17% (20 aa)

VQLVDV----FKDED---------------HYFLLMDLCQCS-LTEVLLK--------------------KKKLSE--HEAAVVIKNVARTVGKMHDMGM
..|.|.    | |..               .....|..||.  | ....|                    . ..||   ... ..  ..  |  ||. . 
IKLYDWNNPIFCDRKYPLCDLIIKTPRALPYMYIVMEYCQGGDLFDWIQKWDEFYFNFIIKFDFNILKRCQGHFSERCWDTCFIMQCLLSAVAYMHSQDI

AHRDIKTDNILL
 |||.| .||..
VHRDLKLENIMV
Kinase CAMK1c-S1_f.AA MAPKAPK 165-236 29 6.6e-13 35.85 In-house 59-137 (292) Show / Hide 
Range on Protein: 165-236
Range on HMM: 59-137/292
Sequence Identity: 29% (23 aa)

VVQLVDVFKD----EDHYFLLMDLCQ-CSLTEVLLK--KKKLSEHEAAVVIKNVARTVGKMHDMGMAHRDIKTDNILLV
.||..|.|..    ..  .| | . .  .| .   .  .|  .|.||. ..| ..  |  .|.|. ||||.|  ||| .
IVQIIDWFENMYQFDKCFYLVMECMEGGELFQHIQQRGHKHFTEREASQIMKDICSAVDFLHSMNIAHRDLKPENILCT
Kinase CAMK1c-S1_f.AA CMGC 143-235 16 6.7e-13 37.8 In-house 52-217 (513) Show / Hide 
Range on Protein: 143-235
Range on HMM: 52-217/513
Sequence Identity: 16% (27 aa)

EDQAE-------------LEIRVLTKLSKSKERSG--------------VVQLVDVFKDED-----------------HYFLLMDLCQCSLTEVLLKKK-
|.||               ||. | .|.| ..  .              .|.| |.|....                 | .| .......| ... ... 
EEQAKSTIEKDGFPIRALREIKILKHLNKNHDP-NWQRRDDPDNKHHNNIVKLYDIFYHKNSDGNEYEDKHIISQHFNHLYLVFEYMDHDLYQYIKNNQF

--------KLSEHE------------AAVVI------KNVARTVG--KMHDMG--MAHRDIKTDNILL
        .||| .                .      . . | .    .| ..    |||.|  |||.
DYQGKRPMPLSE-HENKHPHRRPPHNIKYFMIHIRYMYQILRGLKLKYCHSHWGNIIHRDLKPENILI
Kinase CAMK1c-S1_f.AA MSK 165-235 31 1.2e-12 39.1 In-house 63-134 (277) Show / Hide 
Range on Protein: 165-235
Range on HMM: 63-134/277
Sequence Identity: 31% (23 aa)

VVQLVDVFKDEDHYFLLMDLCQCS-LTEVLLKKKKLSEHEAAVVIKNVARTVGKMHDMGMAHRDIKTDNILL
.|.| ..|.|. | .| |..|.   |.. . |... .|.|.....  .   |  ||. |  |||.|  |||.
IVNLHYAFQDQCHTYLVMEYCNGGELFTHIRKREHFDESECRMIMRELVMAVDHMHQKGIIHRDLKPENILF
Kinase CAMK1c-S1_f.AA CAMKL 165-235 28 1.5e-12 36.2 In-house 77-160 (297) Show / Hide 
Range on Protein: 165-235
Range on HMM: 77-160/297
Sequence Identity: 28% (24 aa)

VVQLVDVFKDEDH------YFLLMDLCQCS---LTEVLLKK----KKLSEHEAAVVIKNVARTVGKMHDMGMAHRDIKTDNILL
...| .|. ...|      ..| | .|.     | . . |.    ....||||    . .   |  .|..| .||||| .||||
IIKLYEVIETPEHDIETKKIYLVMEYCSGGEMDLFDYIVKHGHRRGRMPEHEARRYFRQIVSAVNYCHSHGIVHRDIKPENILL
Kinase CAMK1c-S1_f.AA PASK 148-235 28 3.2e-12 34.12 In-house 53-143 (260) Show / Hide 
Range on Protein: 148-235
Range on HMM: 53-143/260
Sequence Identity: 28% (26 aa)

LEIRVLTKLSKSKERSGVVQLVDVFKDEDHYFLLMDLCQCS----LTEVLLKKKKLSEHEAAVVIKNVARTVGKMHDMGMAHRDIKTDNILL
||| ....| | .    .|...|.| ..| | | |          | ..   .... ||.|  . . |.  |.  |. |  |||||  |. .
LEIHIMQTLNK-NPHENIVKVLDFFENDDFYQLVMEKHGSGGCMDLFDFIDRHPNMDEHLASYIFRQVVAAVKYLHEQGIVHRDIKDENVII
S_TKc CAMK1c-S1_f.AA S_TKc 71-251 11 0.000323 -115.07 SMART 1-220 (231) Show / Hide 
Range on Protein: 71-251
Range on HMM: 1-220/231
Sequence Identity: 11% (33 aa)

IDLDGLLGA------LRGLKEELYELLKLPLPQEQERESTESKRLMDEQRALVRSMEAMEFNQASIRDLFSVERSTTLEDQAELEIRVLTKLSKSKERSG
 ..  ..|        .. . .                        . ..  .  .                       .... ||..| |         
YEILRKIGKGAFGKVYKCRHKK------------------------TGRIVAIKIIK----------------------EHIRREIQILKK-----HHPN

VVQLVDVFKDEDHYFLLMDLCQC---SLTEVLLKKKK------LSEHEAAVVIKNVARTVGKMHDMGMAHRDIKTDNILL--------------------
.|.| ||| | ||... |..|     .| ... |...      ..| .|. ... ... .  .|..|  |||.| .||||                    
IVKLYDVFQD-DHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDEHIKICDFGLARQLTTFCG

--------VVTLRGMDG-------------------------------------------ILMLD---------RN
        |.   | ..                                           .|  |          .
TPWYMAPEVL---GYGKCKCDWWSCGCILYEMLCGYPPFPQMQMMFKKIGSPEAKDFIRKCLQKDPEKRPTAEALQ