Gene BUB_b-1 (S.moellendorffii)

BUB_b-1

Species: S.moellendorffii
Alias: BUB_b-1
External Links:
Annotation:

Classification

Group: Other
Family: BUB

Sequence

Name Sequence Type Origin Length Description Download
BUB_b-1.AA Protein None 366 None Fasta, JSON
BUB_b-1.NA RNA None 1101 None Fasta, JSON

Protein domain

Protein domains of BUB_b-1.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Mad3_BUB1_I BUB_b-1.AA Mad3_BUB1_I 39-163 45 8.8e-55 192.98 Pfam 1-134 (134) Show / Hide 
Range on Protein: 39-163
Range on HMM: 1-134/134
Sequence Identity: 45% (61 aa)

LIEQRRILLEKIDDYV---GDDPLEPWIRCIEWTKEAFPS--GGSQSGILPMLELCLRTFCDDSKYKSDLRYLKLWLDYADRCT----HPRDIYVFLEVN
|..||. . | |..|    |||||.||.|.|.|..||.|.  |..|||....|| |.. | .| .|| | ||||.|| |.. |.    .||||..... .
LQQQRQQFEEEIQNYECEEGDDPLQPWYRYIKWMEEAYPQGGGTKQSGLPTLLERCVKYFWHDERYKNDPRYLKIWLWYMNYCNNNFDEPRDIFQYMYNQ

DIGQTYAQFYEAYASYLERCKNLSKANEVFQIGI
 ||.. |.|||..|.|||. ... ||.|||| ||
GIGTKCALFYEEWAQYLESMGKWQKADEVFQLGI
Mad3_BUB1_I BUB_b-1.AA Mad3_BUB1_I 39-163 42 1.1e-54 188.94 SMART 1-133 (133) Show / Hide 
Range on Protein: 39-163
Range on HMM: 1-133/133
Sequence Identity: 42% (57 aa)

LIEQRRILLEKI--DDYVGDDPLEPWIRCIEWTKEAFPSG--GSQSGILPMLELCLRTFCDDSKYKSDLRYLKLWLDYADRC----THPRDIYVFLEVND
| .||. . ..|  | | |||||..|.|.| ||....|.|  ..|||....|| |.| | ||..|| | ||||.|. |.| |     .||.|....... 
LEQQRQEFEQEIQDDSYEGDDPLDVWYRYIKWTEQNYPQGQQTKQSGLQTLLERCTRYFWDDERYKNDPRYLKIWIWYMDMCYNYFDEPREIFQYMYRHG

IGQTYAQFYEAYASYLERCKNLSKANEVFQIGI
||.  |.|||..|...|  .|. ||.|..| ||
IGTQCALFYEEWAQWYENMGNYQKADEIYQLGI